Transcript: ENST00000245539.6 MRPS7-001

Description

mitochondrial ribosomal protein S7 [Source:HGNC Symbol;Acc:14499]

Gene Synonyms

MRP-S, MRP-S7, RP-S7, RPMS7, S7mt, bMRP27a

Location

Chromosome 17: 73,257,755-73,262,454 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 5 domains and features, is associated with 2564 variant alleles and maps to 316 oligo probes.

Gene

This transcript is a product of gene ENSG00000125445.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000245539.6	MRPS7-001	1406	242aa	ENSP00000245539.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11718	Q96Q63 Q9Y2R9	NM_015971.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000579761.1	MRPS7-002	1717	183aa	ENSP00000463263.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QKW2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000579002.1	MRPS7-003	1638	271aa	ENSP00000463683.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QLS3 Q96Q63	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000581993.1	MRPS7-005	731	172aa	ENSP00000463870.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q96Q63	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000584678.1	MRPS7-006	692	156aa	ENSP00000462506.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q96Q63	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000583407.1	MRPS7-007	864	28aa	ENSP00000462677.1	Nonsense mediated decay		J3KSV8	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000577767.1	MRPS7-004	566	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,406 bps, Translation length: 242 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y2R9

CCDS

This transcript is a member of the Human CCDS set: CCDS11718

Version

ENST00000245539.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000446666 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000245539.6 MRPS7-001

Summary