Transcript: ENST00000340807.3 GPR18-001

Description

G protein-coupled receptor 18 [Source:HGNC Symbol;Acc:4472]

Gene Synonyms

GPCRW

Location

Chromosome 13: 99,906,986-99,913,998 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 26 domains and features, is associated with 3054 variant alleles and maps to 414 oligo probes.

Gene

This transcript is a product of gene ENSG00000125245.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000340807.3	GPR18-001	1698	331aa	ENSP00000343428.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9491	H9NIM1 Q14330 Q5JUH9	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000397473.2	GPR18-202	1660	331aa	ENSP00000380613.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9491	H9NIM1 Q14330 Q5JUH9	NM_005292.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000397470.2	GPR18-201	1468	331aa	ENSP00000380610.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9491	H9NIM1 Q14330 Q5JUH9	NM_001098200.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000416594.1	GPR18-002	741	98aa	ENSP00000401611.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5JUH9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 1, Transcript length: 1,698 bps, Translation length: 331 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q14330

CCDS

This transcript is a member of the Human CCDS set: CCDS9491

Version

ENST00000340807.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000045585 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000340807.3 GPR18-001

Summary