Transcript: ENST00000515050.1 CXCL6-002

Description

chemokine (C-X-C motif) ligand 6 [Source:HGNC Symbol;Acc:10643]

Gene Synonyms

CKA-3, GCP-2, GCP2, SCYB6

Location

About this transcript

This transcript has 3 exons, is annotated with 16 domains and features, is associated with 573 variant alleles and maps to 151 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000226317.5	CXCL6-001	1718	114aa	ENSP00000226317.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3560	P80162	NM_002993.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000515050.1	CXCL6-002	557	113aa	ENSP00000424819.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RF92	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000503446.1	CXCL6-003	541	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 557 bps, Translation length: 113 residues

Version

ENST00000515050.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000362317 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.