Transcript: ENST00000377886.2 SLC17A1-003

Description

solute carrier family 17 (organic anion transporter), member 1 [Source:HGNC Symbol;Acc:10929]

Gene Synonyms

NAPI-1, NPT-1, NPT1

Location

Chromosome 6: 25,783,354-25,832,224 reverse strand.

About this transcript

This transcript has 12 exons, is annotated with 10 domains and features, is associated with 19018 variant alleles and maps to 430 oligo probes.

Gene

This transcript is a product of gene ENSG00000124568.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000244527.4	SLC17A1-001	1844	467aa	ENSP00000244527.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4565	Q14916 Q96KL5 Q96PF5	NM_005074.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000476801.1	SLC17A1-002	1704	467aa	ENSP00000420614.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4565	Q14916 Q96KL5 Q96PF5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000427328.1	SLC17A1-201	1679	413aa	ENSP00000410549.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q14916 Q96KL5 Q96PF5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000468082.1	SLC17A1-004	1242	413aa	ENSP00000420546.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q14916 Q96KL5 Q96PF5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000377886.2	SLC17A1-003	1433	209aa	ENSP00000367118.2	Nonsense mediated decay		E9PGW3 Q96PF5	-	-

Summary

Statistics

Exons: 12, Coding exons: 6, Transcript length: 1,433 bps, Translation length: 209 residues

Version

ENST00000377886.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000353947 (version 1)

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Transcript: ENST00000377886.2 SLC17A1-003

Summary