Transcript: ENST00000261497.4 USP22-006

Description

ubiquitin specific peptidase 22 [Source:HGNC Symbol;Acc:12621]

Gene Synonyms

KIAA1063, USP3L

Location

Chromosome 17: 20,902,910-20,946,352 reverse strand.

About this transcript

This transcript has 13 exons, is annotated with 11 domains and features, is associated with 22358 variant alleles and maps to 701 oligo probes.

Gene

This transcript is a product of gene ENSG00000124422.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000261497.4	USP22-006	5216	525aa	ENSP00000261497.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42285	K7ERX6 K7ESK0 Q9NSJ7 Q9UPT9	NM_015276.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000537526.2	USP22-005	4976	513aa	ENSP00000440950.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ERX6 K7ESK0 Q9NSJ7 Q9UPT9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000476111.1	USP22-003	573	125aa	ENSP00000468457.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ERX6 K7ESK0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000584538.1	USP22-008	554	107aa	ENSP00000468748.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ESK0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000582335.1	USP22-011	306	102aa	ENSP00000464499.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000579645.1	USP22-001	1906	194aa	ENSP00000464398.1	Nonsense mediated decay		J3QRV6	-	-
ENST00000455117.2	USP22-009	677	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000577610.1	USP22-010	564	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000478443.1	USP22-002	1071	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000578446.1	USP22-013	605	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000463692.1	USP22-004	355	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 5,216 bps, Translation length: 525 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UPT9

CCDS

This transcript is a member of the Human CCDS set: CCDS42285

Version

ENST00000261497.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000444169 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000261497.4 USP22-006

Summary