Transcript: ENST00000243347.3 TNFAIP6-001

Description

tumor necrosis factor, alpha-induced protein 6 [Source:HGNC Symbol;Acc:11898]

Gene Synonyms

TSG-6, TSG6

Location

About this transcript

This transcript has 6 exons, is annotated with 18 domains and features, is associated with 9503 variant alleles and maps to 418 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000243347.3	TNFAIP6-001	1422	277aa	ENSP00000243347.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2193	P98066	NM_007115.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000460812.1	TNFAIP6-002	501	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,422 bps, Translation length: 277 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P98066

CCDS

This transcript is a member of the Human CCDS set: CCDS2193

Version

ENST00000243347.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000254834 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.