Transcript: ENST00000379297.1 ACOT9-003

Description

acyl-CoA thioesterase 9 [Source:HGNC Symbol;Acc:17152]

Gene Synonyms

ACATE2, CGI-16, MT-ACT48, MTACT48

Location

Chromosome X: 23,721,794-23,725,317 reverse strand.

About this transcript

This transcript has 6 exons, is associated with 1341 variant alleles and maps to 293 oligo probes.

Gene

This transcript is a product of gene ENSG00000123130.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000379303.5	ACOT9-008	3117	448aa	ENSP00000368605.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43924	Q9H2R8 Q9Y305	NM_001037171.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000379295.1	ACOT9-004	2768	379aa	ENSP00000368597.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9H2R8 Q9Y305	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000336430.7	ACOT9-001	1675	439aa	ENSP00000336580.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS35216	Q96EA2 Q9H2R8 Q9Y305	NM_001033583.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000473710.1	ACOT9-009	793	264aa	ENSP00000420490.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C5Q2	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000492081.1	ACOT9-005	683	136aa	ENSP00000417778.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J7L8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000494361.1	ACOT9-007	1682	46aa	ENSP00000420238.1	Nonsense mediated decay		F8WDI2	-	-
ENST00000379297.1	ACOT9-003	1295	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000449612.2	ACOT9-006	479	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 1,295 bps,

Version

ENST00000379297.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000056067 (version 2)

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Transcript: ENST00000379297.1 ACOT9-003

Summary