Transcript: ENST00000413026.1 ECD-003

Description

ecdysoneless homolog (Drosophila) [Source:HGNC Symbol;Acc:17029]

Gene Synonyms

GCR2, HSGT1, SGT1, hSGT1

Location

Chromosome 10: 74,914,068-74,927,836 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 3 domains and features, is associated with 5654 variant alleles and maps to 172 oligo probes.

Gene

This transcript is a product of gene ENSG00000122882.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000430082.2	ECD-006	2246	677aa	ENSP00000401566.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44434	C9J316 O95905	NM_001135752.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000372979.4	ECD-001	3069	644aa	ENSP00000362070.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7321	C9J316 O95905	NM_007265.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000454759.2	ECD-007	2084	601aa	ENSP00000395786.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44433	O95905	NM_001135753.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000453402.1	ECD-002	884	212aa	ENSP00000391367.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J316	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000413026.1	ECD-003	877	217aa	ENSP00000416288.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JGV1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000494307.1	ECD-005	457	87aa	ENSP00000475102.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000484976.2	ECD-004	1679	163aa	ENSP00000433778.1	Nonsense mediated decay		F2Z2R1	-	-
ENST00000610256.1	ECD-008	581	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 877 bps, Translation length: 217 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000413026.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000048608 (version 1)

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Recent locations

Transcript: ENST00000413026.1 ECD-003

Summary