Transcript: ENST00000377959.1 GLIPR2-004

Description

GLI pathogenesis-related 2 [Source:HGNC Symbol;Acc:18007]

Gene Synonyms

C9orf19, GAPR-1, GAPR1

Location

About this transcript

This transcript has 4 exons, is annotated with 9 domains and features, is associated with 11790 variant alleles and maps to 218 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000377960.4	GLIPR2-001	1890	154aa	ENSP00000367196.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6598	D3DRP5 Q9H4G4	NM_022343.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000396613.3	GLIPR2-201	2272	12aa	ENSP00000379857.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000377959.1	GLIPR2-004	812	128aa	ENSP00000367195.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS69595	Q5VZR0	NM_001287010.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000474050.1	GLIPR2-002	2702	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 812 bps, Translation length: 128 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS69595

Version

ENST00000377959.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000052417 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.