Transcript: ENST00000497923.1 PTGFR-004

Description

prostaglandin F receptor (FP) [Source:HGNC Symbol;Acc:9600]

Gene Synonyms

Location

About this transcript

This transcript has 5 exons, is annotated with 25 domains and features, is associated with 19736 variant alleles and maps to 283 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000370757.3	PTGFR-001	4379	359aa	ENSP00000359793.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS686	P43088	NM_000959.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000370756.3	PTGFR-003	4450	297aa	ENSP00000359792.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30759	P43088	NM_001039585.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000370758.1	PTGFR-002	4337	359aa	ENSP00000359794.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS686	P43088	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000497923.1	PTGFR-004	1852	297aa	ENSP00000432599.1	Nonsense mediated decay		F2Z2Z6	-	-

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 1,852 bps, Translation length: 297 residues

Version

ENST00000497923.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000095326 (version 3)