Transcript: ENST00000373706.5 HCRTR1-001

Description

hypocretin (orexin) receptor 1 [Source:HGNC Symbol;Acc:4848]

Gene Synonyms

OX1R

Location

About this transcript

This transcript has 7 exons, is annotated with 39 domains and features, is associated with 3794 variant alleles and maps to 345 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000403528.2	HCRTR1-201	2001	425aa	ENSP00000384387.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS344	O43613	NM_001525.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000373706.5	HCRTR1-001	1642	425aa	ENSP00000362810.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS344	O43613	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000373705.1	HCRTR1-002	1170	389aa	ENSP00000362809.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6NMV7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000468521.1	HCRTR1-003	1704	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000485464.1	HCRTR1-004	946	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,642 bps, Translation length: 425 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O43613

CCDS

This transcript is a member of the Human CCDS set: CCDS344

Version

ENST00000373706.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000011042 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.