Transcript: ENST00000367509.4 RNF2-002

Description

ring finger protein 2 [Source:HGNC Symbol;Acc:10061]

Gene Synonyms

BAP-1, BAP1, DING, HIPI3, RING1B, RING2

Location

About this transcript

This transcript has 6 exons, is annotated with 8 domains and features, is associated with 25568 variant alleles and maps to 277 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000367510.3	RNF2-001	3606	336aa	ENSP00000356480.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1365	Q99496	NM_007212.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367509.4	RNF2-002	1677	264aa	ENSP00000356479.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KRH1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000453650.1	RNF2-003	942	246aa	ENSP00000400722.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000498201.1	RNF2-004	631	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 1,677 bps, Translation length: 264 residues

Version

ENST00000367509.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000085794 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.