Transcript: ENST00000541618.1 PLBD1-002

Description

phospholipase B domain containing 1 [Source:HGNC Symbol;Acc:26215]

Gene Synonyms

FLJ22662

Location

About this transcript

This transcript has 6 exons, is annotated with 2 domains and features, is associated with 22963 variant alleles and maps to 169 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000240617.5	PLBD1-001	2426	553aa	ENSP00000240617.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31751	F5H053 Q6P4A8	NM_024829.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000540572.1	PLBD1-003	553	144aa	ENSP00000438367.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H053	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000541618.1	PLBD1-002	857	40aa	ENSP00000441278.1	Nonsense mediated decay		F5GYQ3	-	-
ENST00000541800.2	PLBD1-004	809	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 2, Transcript length: 857 bps, Translation length: 40 residues

Version

ENST00000541618.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000401204 (version 1)