Transcript: ENST00000518870.1 RDH10-003

Description

retinol dehydrogenase 10 (all-trans) [Source:HGNC Symbol;Acc:19975]

Gene Synonyms

SDR16C4

Location

Chromosome 8: 74,207,751-74,209,975 forward strand.

About this transcript

This transcript has 2 exons, is associated with 1097 variant alleles and maps to 82 oligo probes.

Gene

This transcript is a product of gene ENSG00000121039.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000240285.5	RDH10-001	3949	341aa	ENSP00000240285.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6213	E5RHJ9 E5RK48 Q8IZV5	NM_172037.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000519380.1	RDH10-002	978	176aa	ENSP00000428132.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RHJ9 E5RK48	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000521928.1	RDH10-004	436	62aa	ENSP00000429727.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RHJ9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000521013.1	RDH10-005	1367	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000518870.1	RDH10-003	610	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 610 bps,

Version

ENST00000518870.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000378983 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000518870.1 RDH10-003

Summary