Transcript: ENST00000479933.2 TNFRSF8-004

Description

tumor necrosis factor receptor superfamily, member 8 [Source:HGNC Symbol;Acc:11923]

Gene Synonyms

CD30, D1S166E, KI-1, Ki-1

Location

About this transcript

This transcript has 4 exons, is associated with 8363 variant alleles and maps to 252 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000263932.2	TNFRSF8-001	3686	595aa	ENSP00000263932.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS144	A5D8T4	NM_001243.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000417814.2	TNFRSF8-201	2412	483aa	ENSP00000390650.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59989	D3YTD8	NM_001281430.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000413146.2	TNFRSF8-002	2363	132aa	ENSP00000398337.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P28908	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000514649.1	TNFRSF8-003	2412	55aa	ENSP00000421938.1	Nonsense mediated decay		D6RAG8	-	-
ENST00000479933.2	TNFRSF8-004	2120	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 2,120 bps,

Version

ENST00000479933.2

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000367704 (version 1)