Transcript: ENST00000550189.1 NFYB-005

Description

nuclear transcription factor Y, beta [Source:HGNC Symbol;Acc:7805]

Gene Synonyms

CBF-A, CBF-B, HAP3, NF-YB

Location

Chromosome 12: 104,515,032-104,522,390 reverse strand.

About this transcript

This transcript has 4 exons, is associated with 2977 variant alleles and maps to 151 oligo probes.

Gene

This transcript is a product of gene ENSG00000120837.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000240055.3	NFYB-001	3512	207aa	ENSP00000240055.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9098	P25208	NM_006166.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000551727.1	NFYB-003	1727	207aa	ENSP00000447486.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9098	P25208	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000551446.1	NFYB-004	618	131aa	ENSP00000448250.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VSL3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000550881.1	NFYB-002	893	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000550189.1	NFYB-005	586	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 586 bps,

Version

ENST00000550189.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000407788 (version 1)

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Transcript: ENST00000550189.1 NFYB-005

Summary