Transcript: ENST00000239938.4 EGR1-001

Description

early growth response 1 [Source:HGNC Symbol;Acc:3238]

Gene Synonyms

AT225, G0S30, KROX-24, KROX24, NGFI-A, TIS8, ZIF-268, ZNF225

Location

About this transcript

This transcript has 2 exons, is annotated with 25 domains and features, is associated with 2345 variant alleles and maps to 531 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000239938.4	EGR1-001	3138	543aa	ENSP00000239938.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4206	P18146 Q546S1	NM_001964.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 3,138 bps, Translation length: 543 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P18146

CCDS

This transcript is a member of the Human CCDS set: CCDS4206

Version

ENST00000239938.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000251274 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.