Transcript: ENST00000510409.1 PAIP2-005

Description

poly(A) binding protein interacting protein 2 [Source:HGNC Symbol;Acc:17970]

Gene Synonyms

PAIP-2, PAIP2A

Location

Chromosome 5: 138,677,546-138,700,779 forward strand.

About this transcript

This transcript has 3 exons, is associated with 10959 variant alleles and maps to 186 oligo probes.

Gene

This transcript is a product of gene ENSG00000120727.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000394795.2	PAIP2-002	2294	127aa	ENSP00000378275.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4211	D6RA77 Q9BPZ3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000265192.4	PAIP2-001	1459	127aa	ENSP00000265192.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4211	D6RA77 Q9BPZ3	NM_016480.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000510080.1	PAIP2-003	858	127aa	ENSP00000422508.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4211	D6RA77 Q9BPZ3	NM_001033112.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000507755.1	PAIP2-004	776	93aa	ENSP00000423084.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RA77	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000511706.1	PAIP2-008	468	67aa	ENSP00000422821.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6R9Y1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000511381.1	PAIP2-007	365	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000510409.1	PAIP2-005	815	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000507415.1	PAIP2-006	423	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 815 bps,

Version

ENST00000510409.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000373005 (version 1)

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000510409.1 PAIP2-005

Summary