Transcript: ENST00000360541.5 ETF1-001

Description

eukaryotic translation termination factor 1 [Source:HGNC Symbol;Acc:3477]

Gene Synonyms

D5S1995, ERF, ERF1, RF1, SUP45L1, TB3-1

Location

Chromosome 5: 137,841,788-137,878,989 reverse strand.

About this transcript

This transcript has 11 exons, is annotated with 12 domains and features, is associated with 17406 variant alleles and maps to 560 oligo probes.

Gene

This transcript is a product of gene ENSG00000120705.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000360541.5	ETF1-001	3742	437aa	ENSP00000353741.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4207	D6RJE8 I3L492 P62495 Q96CG1	NM_004730.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000499810.2	ETF1-002	3874	404aa	ENSP00000421288.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RJE8 I3L492 Q96CG1	NM_001282185.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000503014.1	ETF1-003	1736	423aa	ENSP00000422203.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z7P8 D6RJE8 I3L492 Q96CG1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000572514.1	ETF1-009	990	208aa	ENSP00000461082.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RJE8 I3L492	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000507939.1	ETF1-006	713	119aa	ENSP00000425689.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RJE8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000512198.1	ETF1-008	745	95aa	ENSP00000422272.1	Nonsense mediated decay		D6RCB3	-	-
ENST00000514005.1	ETF1-005	608	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000506345.1	ETF1-004	933	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000503183.1	ETF1-007	476	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 3,742 bps, Translation length: 437 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P62495

CCDS

This transcript is a member of the Human CCDS set: CCDS4207

Version

ENST00000360541.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000251276 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000360541.5 ETF1-001

Summary