Transcript: ENST00000377252.4 PLXDC2-001

Description

plexin domain containing 2 [Source:HGNC Symbol;Acc:21013]

Gene Synonyms

FLJ14623, TEM7R

Location

About this transcript

This transcript has 14 exons, is annotated with 7 domains and features, is associated with 226421 variant alleles and maps to 990 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000377252.4	PLXDC2-001	12468	529aa	ENSP00000366460.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7132	Q6UX71	NM_032812.7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000377242.3	PLXDC2-002	2822	480aa	ENSP00000366450.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS60497	Q6UX71	NM_001282736.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000377238.2	PLXDC2-003	1903	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 12,468 bps, Translation length: 529 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6UX71

CCDS

This transcript is a member of the Human CCDS set: CCDS7132

Version

ENST00000377252.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000047101 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.