Transcript: ENST00000460828.1 PCMT1-006

Description

protein-L-isoaspartate (D-aspartate) O-methyltransferase [Source:HGNC Symbol;Acc:8728]

Gene Synonyms

PIMT

Location

Chromosome 6: 150,070,863-150,094,286 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 5 domains and features, is associated with 11977 variant alleles and maps to 128 oligo probes.

Gene

This transcript is a product of gene ENSG00000120265.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000367384.2	PCMT1-001	1938	286aa	ENSP00000356354.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59041	C9J0F2 H7BY58	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000464889.1	PCMT1-002	1984	285aa	ENSP00000420813.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5219	C9J0F2 J3KP72	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367380.5	PCMT1-201	1733	227aa	ENSP00000356350.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J0F2 P22061	NM_005389.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367378.1	PCMT1-004	1293	285aa	ENSP00000356348.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5219	C9J0F2 J3KP72	NM_001252053.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000544496.1	PCMT1-202	930	192aa	ENSP00000438247.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z972	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000495487.1	PCMT1-008	548	96aa	ENSP00000418881.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J0F2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000484601.1	PCMT1-003	1095	124aa	ENSP00000417448.1	Nonsense mediated decay		F8WAV5	-	-
ENST00000486585.1	PCMT1-007	801	67aa	ENSP00000418461.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000494411.1	PCMT1-009	600	130aa	ENSP00000417112.1	Nonsense mediated decay		F8WAX2	-	-
ENST00000460828.1	PCMT1-006	582	120aa	ENSP00000420804.1	Nonsense mediated decay		F8WDT3	-	-
ENST00000480010.1	PCMT1-005	377	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 582 bps, Translation length: 120 residues

Version

ENST00000460828.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000351684 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000460828.1 PCMT1-006

Summary