Transcript: ENST00000239231.6 PANK3-001

Description

pantothenate kinase 3 [Source:HGNC Symbol;Acc:19365]

Gene Synonyms

FLJ12899

Location

About this transcript

This transcript has 7 exons, is annotated with 9 domains and features, is associated with 13997 variant alleles and maps to 662 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000239231.6	PANK3-001	10506	370aa	ENSP00000239231.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4368	E5RHA5 Q9H999	NM_024594.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000522176.1	PANK3-002	552	122aa	ENSP00000428631.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RHA5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000520504.1	PANK3-003	313	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 10,506 bps, Translation length: 370 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9H999

CCDS

This transcript is a member of the Human CCDS set: CCDS4368

Version

ENST00000239231.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000252793 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.