Transcript: ENST00000348367.4 GPAM-001

Description

glycerol-3-phosphate acyltransferase, mitochondrial [Source:HGNC Symbol;Acc:24865]

Gene Synonyms

GPAT, GPAT1, KIAA1560, MGC26846

Location

About this transcript

This transcript has 22 exons, is annotated with 11 domains and features, is associated with 13713 variant alleles and maps to 731 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000348367.4	GPAM-001	6369	828aa	ENSP00000265276.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7570	Q6ZMG4 Q9HCL2	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000423155.1	GPAM-201	6356	828aa	ENSP00000409242.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7570	Q6ZMG4 Q9HCL2	NM_020918.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000369425.1	GPAM-002	5664	710aa	ENSP00000358433.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5VW52	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000480130.1	GPAM-003	514	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000498541.1	GPAM-004	351	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 22, Coding exons: 20, Transcript length: 6,369 bps, Translation length: 828 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9HCL2

CCDS

This transcript is a member of the Human CCDS set: CCDS7570

Version

ENST00000348367.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000050377 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.