Transcript: ENST00000553716.1 PGF-003

Description

placental growth factor [Source:HGNC Symbol;Acc:8893]

Gene Synonyms

D12S1900, PGFL, PLGF, PlGF-2, SHGC-10760

Location

Chromosome 14: 75,408,544-75,422,329 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 10 domains and features, is associated with 6106 variant alleles and maps to 378 oligo probes.

Gene

This transcript is a product of gene ENSG00000119630.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000555567.1	PGF-001	1927	170aa	ENSP00000451040.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9835	P49763 Q53XY6	NM_002632.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000553716.1	PGF-003	1699	149aa	ENSP00000451413.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55932	P49763	NM_001207012.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000238607.6	PGF-002	1693	169aa	ENSP00000238607.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3XA84	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000405431.2	PGF-008	666	221aa	ENSP00000385365.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P49763	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000555253.1	PGF-006	3549	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000556939.1	PGF-005	1125	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000557748.1	PGF-007	875	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000555234.1	PGF-004	811	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,699 bps, Translation length: 149 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P49763

CCDS

This transcript is a member of the Human CCDS set: CCDS55932

Version

ENST00000553716.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000413744 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000553716.1 PGF-003

Summary