Transcript: ENST00000527290.1 SPCS2-005

Description

signal peptidase complex subunit 2 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:28962]

Gene Synonyms

KIAA0102, SPC25

Location

Chromosome 11: 74,660,316-74,676,214 forward strand.

About this transcript

This transcript has 2 exons, is associated with 6646 variant alleles and maps to 149 oligo probes.

Gene

This transcript is a product of gene ENSG00000118363.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000263672.6	SPCS2-001	2708	226aa	ENSP00000263672.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44681	Q15005	NM_014752.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000532972.1	SPCS2-004	839	257aa	ENSP00000436759.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PI68	-	-
ENST00000526361.1	SPCS2-003	772	87aa	ENSP00000434248.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PRB9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000530257.1	SPCS2-002	612	157aa	ENSP00000433439.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PL01	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000526883.1	SPCS2-008	498	166aa	ENSP00000434706.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YE04	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000528265.1	SPCS2-006	577	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000527225.1	SPCS2-007	321	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000527290.1	SPCS2-005	265	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 265 bps,

Version

ENST00000527290.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000384591 (version 1)

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Transcript: ENST00000527290.1 SPCS2-005

Summary