Transcript: ENST00000412074.2 CHRNB4-003

Description

cholinergic receptor, nicotinic, beta 4 (neuronal) [Source:HGNC Symbol;Acc:1964]

Location

About this transcript

This transcript has 5 exons, is annotated with 12 domains and features, is associated with 7981 variant alleles and maps to 305 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000261751.3	CHRNB4-001	2623	498aa	ENSP00000261751.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10306	P30926	NM_000750.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000412074.2	CHRNB4-003	1355	231aa	ENSP00000416386.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58392	P30926	NM_001256567.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000559849.1	CHRNB4-002	2080	66aa	ENSP00000457404.1	Nonsense mediated decay		H3BU02	-	-
ENST00000560511.1	CHRNB4-004	727	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000558216.1	CHRNB4-005	578	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000560868.1	CHRNB4-006	547	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,355 bps, Translation length: 231 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P30926

CCDS

This transcript is a member of the Human CCDS set: CCDS58392

Version

ENST00000412074.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000418869 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.