Transcript: ENST00000374332.4 MAN1C1-001

Description

mannosidase, alpha, class 1C, member 1 [Source:HGNC Symbol;Acc:19080]

Gene Synonyms

HMIC, MAN1A3, MAN1C, pp6318

Location

Chromosome 1: 25,943,959-26,112,698 forward strand.

About this transcript

This transcript has 12 exons, is annotated with 18 domains and features, is associated with 70087 variant alleles and maps to 687 oligo probes.

Gene

This transcript is a product of gene ENSG00000117643.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000374332.4	MAN1C1-001	4641	630aa	ENSP00000363452.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS265	A6NGN6 B1AJZ5 Q9NR34	NM_020379.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000263979.3	MAN1C1-002	2627	450aa	ENSP00000263979.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6NGN6 B1AJZ5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000374329.1	MAN1C1-003	2461	401aa	ENSP00000363449.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6NGN6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000473891.1	MAN1C1-005	3420	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000487493.1	MAN1C1-007	1145	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000475314.1	MAN1C1-006	893	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000496532.1	MAN1C1-004	769	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 4,641 bps, Translation length: 630 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NR34

CCDS

This transcript is a member of the Human CCDS set: CCDS265

Version

ENST00000374332.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000012828 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000374332.4 MAN1C1-001

Summary