Transcript: ENST00000236166.3 FMO6P-003

Description

flavin containing monooxygenase 6 pseudogene [Source:HGNC Symbol;Acc:24024]

Gene Synonyms

FMO6

Location

Chromosome 1: 171,107,241-171,130,535 forward strand.

About this transcript

This transcript has 8 exons, is annotated with 29 domains and features, is associated with 9812 variant alleles and maps to 439 oligo probes.

Gene

This transcript is a product of gene ENSG00000117507.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000236166.3	FMO6P-003	1699	418aa	ENSP00000236166.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		O60774	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367754.2	FMO6P-001	2130	64aa	ENSP00000356728.2	Nonsense mediated decay		B5MDN4	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 1,699 bps, Translation length: 418 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O60774

Version

ENST00000236166.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Stop codons

This transcript has a variant, rs1736565, that causes a stop codon to be gained in at least 10% of HapMap or 1000 Genome population(s) CSHL-HAPMAP:HAPMAP-MKK, CSHL-HAPMAP:HAPMAP-CHD, CSHL-HAPMAP:HAPMAP-MEX, CSHL-HAPMAP:HapMap-YRI, CSHL-HAPMAP:HAPMAP-TSI, CSHL-HAPMAP:HapMap-CEU, CSHL-HAPMAP:HapMap-JPT, CSHL-HAPMAP:HAPMAP-GIH, CSHL-HAPMAP:HAPMAP-ASW, CSHL-HAPMAP:HAPMAP-CHB, CSHL-HAPMAP:HapMap-HCB.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000385941 (version 4)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000236166.3 FMO6P-003

Summary