Transcript: ENST00000372259.5 ERI3-003

Description

ERI1 exoribonuclease family member 3 [Source:HGNC Symbol;Acc:17276]

Gene Synonyms

FLJ22943, PINT1, PRNPIP, PRNPIP1

Location

Chromosome 1: 44,686,742-44,788,715 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 6 domains and features, is associated with 41135 variant alleles and maps to 324 oligo probes.

Gene

This transcript is a product of gene ENSG00000117419.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000372257.2	ERI3-001	1684	337aa	ENSP00000361331.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30696	B4DEX5 B4DN03 O43414	NM_024066.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000372259.5	ERI3-003	1332	222aa	ENSP00000361333.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DEX5 O43414	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000456170.1	ERI3-006	1103	204aa	ENSP00000390710.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0Y4B0	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000537474.1	ERI3-201	1067	160aa	ENSP00000438360.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DEX5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000457571.1	ERI3-002	975	250aa	ENSP00000412291.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F6UGJ8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000452396.1	ERI3-004	764	176aa	ENSP00000396764.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F6QUN3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000495828.1	ERI3-005	972	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489710.1	ERI3-008	394	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000479101.1	ERI3-007	367	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000462341.1	ERI3-009	320	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,332 bps, Translation length: 222 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O43414

Version

ENST00000372259.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000020321 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000372259.5 ERI3-003

Summary