Transcript: ENST00000492682.1 TTF2-003

Description

transcription termination factor, RNA polymerase II [Source:HGNC Symbol;Acc:12398]

Gene Synonyms

HuF2

Location

Chromosome 1: 117,635,409-117,644,371 forward strand.

About this transcript

This transcript has 6 exons, is associated with 3547 variant alleles and maps to 341 oligo probes.

Gene

This transcript is a product of gene ENSG00000116830.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000369466.4	TTF2-001	9462	1162aa	ENSP00000358478.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS892	Q9UNY4	NM_003594.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000427271.1	TTF2-005	639	143aa	ENSP00000408111.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000480701.1	TTF2-006	983	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000470935.1	TTF2-002	849	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000492682.1	TTF2-003	803	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000469638.1	TTF2-007	775	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000463696.1	TTF2-004	662	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 803 bps,

Version

ENST00000492682.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000033314 (version 1)

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Transcript: ENST00000492682.1 TTF2-003

Summary