Transcript: ENST00000262340.5 RPE65-001

Description

retinal pigment epithelium-specific protein 65kDa [Source:HGNC Symbol;Acc:10294]

Gene Synonyms

LCA2, RP20, mRPE65, rd12, sRPE65

Location

About this transcript

This transcript has 14 exons, is annotated with 4 domains and features, is associated with 9801 variant alleles and maps to 515 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000262340.5	RPE65-001	2610	533aa	ENSP00000262340.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS643	C7FEP0 Q16518 Q2EKB8	NM_000329.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 2,610 bps, Translation length: 533 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q16518

CCDS

This transcript is a member of the Human CCDS set: CCDS643

Version

ENST00000262340.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000025509 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.