Transcript: ENST00000371348.1 TMEM59-002

Description

transmembrane protein 59 [Source:HGNC Symbol;Acc:1239]

Gene Synonyms

C1orf8, HSPC001

Location

Chromosome 1: 54,497,347-54,513,686 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 4 domains and features, is associated with 6556 variant alleles and maps to 441 oligo probes.

Gene

This transcript is a product of gene ENSG00000116209.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000234831.5	TMEM59-001	1696	323aa	ENSP00000234831.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS586	Q5T6Z8 Q9BXS4	NM_004872.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000371344.1	TMEM59-003	2473	192aa	ENSP00000360395.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T6Z8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000371348.1	TMEM59-002	1900	192aa	ENSP00000360399.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T6Z8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000371341.1	TMEM59-005	1116	192aa	ENSP00000360392.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T6Z8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000452421.1	TMEM59-008	1074	285aa	ENSP00000397772.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T704	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000420738.1	TMEM59-007	728	144aa	ENSP00000413792.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T706	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000440019.1	TMEM59-006	618	144aa	ENSP00000399761.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T706	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000371337.3	TMEM59-004	600	145aa	ENSP00000360388.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T703	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000470395.1	TMEM59-009	480	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 5, Transcript length: 1,900 bps, Translation length: 192 residues

Version

ENST00000371348.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000023255 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000371348.1 TMEM59-002

Summary