Transcript: ENST00000495118.1 ATP6V1B1-009

Description

ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1 [Source:HGNC Symbol;Acc:853]

Gene Synonyms

ATP6B1, RTA1B, VATB, VMA2, VPP3, Vma2

Location

Chromosome 2: 71,187,069-71,188,950 forward strand.

About this transcript

This transcript has 3 exons, is associated with 896 variant alleles and maps to 122 oligo probes.

Gene

This transcript is a product of gene ENSG00000116039.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000234396.4	ATP6V1B1-001	1891	513aa	ENSP00000234396.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1912	B4DWH7 C9JTN0 C9JZ02 P15313 Q71UA2	NM_001692.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000412314.1	ATP6V1B1-005	1805	496aa	ENSP00000388353.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JL73 C9JTN0 C9JZ02	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000454446.1	ATP6V1B1-007	863	249aa	ENSP00000408361.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JNS9 C9JTN0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000432098.1	ATP6V1B1-006	546	74aa	ENSP00000387599.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JTN0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000433895.1	ATP6V1B1-010	472	118aa	ENSP00000407840.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JZ02	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000432367.1	ATP6V1B1-004	1905	248aa	ENSP00000405114.1	Nonsense mediated decay		C9J5E3 C9JTN0	-	-
ENST00000463380.1	ATP6V1B1-008	574	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000495118.1	ATP6V1B1-009	467	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 467 bps,

Version

ENST00000495118.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000332238 (version 1)

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000495118.1 ATP6V1B1-009

Summary