Transcript: ENST00000409260.1 STK16-007

Description

serine/threonine kinase 16 [Source:HGNC Symbol;Acc:11394]

Gene Synonyms

KRCT, MPSK, MPSK1, PKL12, TSF1

Location

Chromosome 2: 220,110,614-220,113,613 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 10 domains and features, is associated with 1484 variant alleles and maps to 389 oligo probes.

Gene

This transcript is a product of gene ENSG00000115661.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000409638.3	STK16-001	2868	305aa	ENSP00000386928.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42822	O75716	NM_001008910.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000396738.2	STK16-004	1673	305aa	ENSP00000379964.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42822	O75716	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409260.1	STK16-007	1493	350aa	ENSP00000387156.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B8ZZN3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409743.1	STK16-012	1069	273aa	ENSP00000386553.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B8ZZI5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409516.3	STK16-003	895	187aa	ENSP00000386309.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DPS1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000486813.1	STK16-013	444	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000496443.1	STK16-005	2094	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000478018.1	STK16-008	1930	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000475696.1	STK16-002	1513	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000496800.1	STK16-006	1243	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000475342.1	STK16-011	866	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000491697.1	STK16-009	579	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000461417.1	STK16-010	545	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,493 bps, Translation length: 350 residues

Version

ENST00000409260.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000335685 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000409260.1 STK16-007

Summary