Transcript: ENST00000419525.1 CENPA-005

Description

centromere protein A [Source:HGNC Symbol;Acc:1851]

Gene Synonyms

CENP-A, CenH3

Location

About this transcript

This transcript has 5 exons, is annotated with 3 domains and features, is associated with 3316 variant alleles and maps to 467 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000335756.4	CENPA-001	1452	140aa	ENSP00000336868.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1729	P49450	NM_001809.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000233505.8	CENPA-006	1299	114aa	ENSP00000233505.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42662	P49450	NM_001042426.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000419525.1	CENPA-005	950	86aa	ENSP00000404963.1	Nonsense mediated decay		F8WD88	-	-
ENST00000475662.1	CENPA-003	1208	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000460030.1	CENPA-002	745	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000472719.1	CENPA-004	689	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 950 bps, Translation length: 86 residues

Version

ENST00000419525.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000324703 (version 1)