Transcript: ENST00000496710.1 ARHGEF26-003

Description

Rho guanine nucleotide exchange factor (GEF) 26 [Source:HGNC Symbol;Acc:24490]

Gene Synonyms

CSGEF, DKFZP434D146, HMFN1864, SGEF

Location

About this transcript

This transcript has 15 exons, is annotated with 14 domains and features, is associated with 60860 variant alleles and maps to 633 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000356448.4	ARHGEF26-001	5254	871aa	ENSP00000348828.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46938	Q96DR7	NM_001251962.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000465093.1	ARHGEF26-002	3929	871aa	ENSP00000423418.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46938	Q96DR7	NM_015595.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000465817.1	ARHGEF26-004	2353	446aa	ENSP00000423295.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q96DR7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000496710.1	ARHGEF26-003	3781	791aa	ENSP00000424446.1	Nonsense mediated decay	CCDS58858	Q96DR7	-	-
ENST00000483068.1	ARHGEF26-005	3106	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 15, Coding exons: 13, Transcript length: 3,781 bps, Translation length: 791 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96DR7

CCDS

This transcript is a member of the Human CCDS set: CCDS58858

Version

ENST00000496710.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000353289 (version 2)