Transcript: ENST00000348721.3 CISH-001

Description

cytokine inducible SH2-containing protein [Source:HGNC Symbol;Acc:1984]

Gene Synonyms

BACTS2, CIS, CIS-1, G18, SOCS

Location

About this transcript

This transcript has 3 exons, is annotated with 18 domains and features, is associated with 2303 variant alleles and maps to 304 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000443053.2	CISH-002	2167	275aa	ENSP00000409346.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46834	Q9NSE2	NM_013324.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000348721.3	CISH-001	2043	258aa	ENSP00000294173.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2831	Q9NSE2	NM_145071.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000491847.1	CISH-003	5042	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 2,043 bps, Translation length: 258 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NSE2

CCDS

This transcript is a member of the Human CCDS set: CCDS2831

Version

ENST00000348721.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000346245 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.