Transcript: ENST00000440836.1 GNAT1-003

Description

guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1 [Source:HGNC Symbol;Acc:4393]

Gene Synonyms

CSNBAD3, GBT1, GNATR

Location

Chromosome 3: 50,230,105-50,231,270 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 6 domains and features, is associated with 808 variant alleles and maps to 227 oligo probes.

Gene

This transcript is a product of gene ENSG00000114349.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000232461.3	GNAT1-001	2417	350aa	ENSP00000232461.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2812	C9JCV8 P11488	NM_144499.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000433068.1	GNAT1-002	1224	350aa	ENSP00000387555.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2812	C9JCV8 P11488	NM_000172.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000440836.1	GNAT1-003	479	130aa	ENSP00000403537.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JCV8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000481246.1	GNAT1-005	336	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000467787.1	GNAT1-004	328	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 479 bps, Translation length: 130 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000440836.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000345958 (version 1)

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Transcript: ENST00000440836.1 GNAT1-003

Summary