Transcript: ENST00000497027.1 WNT5A-005

Description

wingless-type MMTV integration site family, member 5A [Source:HGNC Symbol;Acc:12784]

Gene Synonyms

hWNT5A

Location

Chromosome 3: 55,504,021-55,515,421 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 12 domains and features, is associated with 5190 variant alleles and maps to 202 oligo probes.

Gene

This transcript is a product of gene ENSG00000114251.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000474267.1	WNT5A-001	6042	380aa	ENSP00000417310.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46850	P41221	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000264634.4	WNT5A-201	5837	380aa	ENSP00000264634.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46850	P41221	NM_003392.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000497027.1	WNT5A-005	1299	365aa	ENSP00000420104.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58835	P41221	NM_001256105.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000482079.1	WNT5A-009	959	214aa	ENSP00000418184.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J8I8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000493406.1	WNT5A-007	521	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000497817.1	WNT5A-008	661	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 1,299 bps, Translation length: 365 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P41221

CCDS

This transcript is a member of the Human CCDS set: CCDS58835

Version

ENST00000497027.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000350845 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000497027.1 WNT5A-005

Summary