Transcript: ENST00000264734.2 CLDN16-001

Description

claudin 16 [Source:HGNC Symbol;Acc:2037]

Gene Synonyms

HOMG3, PCLN1

Location

About this transcript

This transcript has 5 exons, is annotated with 16 domains and features, is associated with 11122 variant alleles and maps to 355 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000264734.2	CLDN16-001	3273	305aa	ENSP00000264734.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3296	Q9Y5I7	NM_006580.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000456423.1	CLDN16-002	430	119aa	ENSP00000414136.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0SDD8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000468220.1	CLDN16-003	578	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 3,273 bps, Translation length: 305 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y5I7

CCDS

This transcript is a member of the Human CCDS set: CCDS3296

Version

ENST00000264734.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000343519 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.