Transcript: ENST00000495993.1 ACTR8-006

Description

ARP8 actin-related protein 8 homolog (yeast) [Source:HGNC Symbol;Acc:14672]

Gene Synonyms

ARP8, INO80N, hArp8

Location

Chromosome 3: 53,905,185-53,907,095 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 798 variant alleles and maps to 110 oligo probes.

Gene

This transcript is a product of gene ENSG00000113812.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000335754.3	ACTR8-001	3629	624aa	ENSP00000336842.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2875	C9J7L6 Q9H981	NM_022899.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000482349.1	ACTR8-003	2091	513aa	ENSP00000419429.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J7L6 Q9H981	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000486794.1	ACTR8-002	1202	378aa	ENSP00000417230.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000231909.7	ACTR8-201	1198	329aa	ENSP00000231909.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9H981	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000498740.1	ACTR8-004	708	102aa	ENSP00000417781.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J7L6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000488802.1	ACTR8-005	683	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000495993.1	ACTR8-006	517	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 517 bps,

Version

ENST00000495993.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000351658 (version 1)

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Transcript: ENST00000495993.1 ACTR8-006

Summary