Transcript: ENST00000481195.1 PPP2CA-001

Description

protein phosphatase 2, catalytic subunit, alpha isozyme [Source:HGNC Symbol;Acc:9299]

Gene Synonyms

PP2Ac, PP2CA, PP2Calpha, RP-C

Location

Chromosome 5: 133,530,025-133,561,833 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 14 domains and features, is associated with 14817 variant alleles and maps to 679 oligo probes.

Gene

This transcript is a product of gene ENSG00000113575.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000481195.1	PPP2CA-001	4649	309aa	ENSP00000418447.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4173	B3KQ51 B3KUN1 E5RHP4 P67775	NM_002715.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000522385.1	PPP2CA-005	585	126aa	ENSP00000430869.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RHP4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000523082.1	PPP2CA-006	510	145aa	ENSP00000428816.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7ESG8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000231504.5	PPP2CA-007	564	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000495833.1	PPP2CA-003	739	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000472253.1	PPP2CA-004	574	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 4,649 bps, Translation length: 309 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P67775

CCDS

This transcript is a member of the Human CCDS set: CCDS4173

Version

ENST00000481195.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000251165 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000481195.1 PPP2CA-001

Summary