Transcript: ENST00000514738.1 CDH6-003

Description

cadherin 6, type 2, K-cadherin (fetal kidney) [Source:HGNC Symbol;Acc:1765]

Gene Synonyms

CAD6, KCAD

Location

About this transcript

This transcript has 11 exons, is annotated with 39 domains and features, is associated with 52476 variant alleles and maps to 496 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000265071.2	CDH6-001	8476	790aa	ENSP00000265071.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3894	P55285	NM_004932.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000514738.1	CDH6-003	2569	608aa	ENSP00000424843.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RF86	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000506396.1	CDH6-002	2759	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000504835.1	CDH6-005	1568	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000508132.1	CDH6-004	678	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 2,569 bps, Translation length: 608 residues

Version

ENST00000514738.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000366553 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.