Transcript: ENST00000350881.2 THBS4-001

Description

thrombospondin 4 [Source:HGNC Symbol;Acc:11788]

Gene Synonyms

TSP4

Location

Chromosome 5: 79,331,171-79,379,110 forward strand.

About this transcript

This transcript has 22 exons, is annotated with 56 domains and features, is associated with 19689 variant alleles and maps to 692 oligo probes.

Gene

This transcript is a product of gene ENSG00000113296.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000350881.2	THBS4-001	3222	961aa	ENSP00000339730.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4049	E7ES19 P35443	NM_003248.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000511733.1	THBS4-005	3094	870aa	ENSP00000422298.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7ES19	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000504720.1	THBS4-004	853	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000515510.1	THBS4-002	612	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000513310.1	THBS4-007	573	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000510218.1	THBS4-006	564	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000511888.1	THBS4-003	558	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 22, Coding exons: 22, Transcript length: 3,222 bps, Translation length: 961 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P35443

CCDS

This transcript is a member of the Human CCDS set: CCDS4049

Version

ENST00000350881.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000226977 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000350881.2 THBS4-001

Summary