Transcript: ENST00000522381.1 CLINT1-008

Description

clathrin interactor 1 [Source:HGNC Symbol;Acc:23186]

Gene Synonyms

CLINT, ENTH, EPN4, EPNR, KIAA0171

Location

Chromosome 5: 157,214,479-157,218,732 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 1873 variant alleles and maps to 203 oligo probes.

Gene

This transcript is a product of gene ENSG00000113282.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000523908.1	CLINT1-002	2346	643aa	ENSP00000429824.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56389	Q14677	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000523094.1	CLINT1-003	3987	625aa	ENSP00000429345.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56388	Q14677	NM_001195556.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000296951.5	CLINT1-201	3479	625aa	ENSP00000296951.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56388	Q14677	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000411809.2	CLINT1-001	3440	625aa	ENSP00000388340.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47330	Q14677	NM_014666.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000530742.1	CLINT1-010	3344	625aa	ENSP00000433419.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56388	Q14677	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000522381.1	CLINT1-008	721	66aa	ENSP00000434334.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000521615.1	CLINT1-006	399	133aa	ENSP00000433013.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000521047.1	CLINT1-007	733	55aa	ENSP00000431858.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000518855.1	CLINT1-004	3394	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000524306.1	CLINT1-005	2905	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000530302.1	CLINT1-009	668	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 721 bps, Translation length: 66 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000522381.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000374008 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000522381.1 CLINT1-008

Summary