Transcript: ENST00000366953.3 SLC22A2-001

Description

solute carrier family 22 (organic cation transporter), member 2 [Source:HGNC Symbol;Acc:10966]

Gene Synonyms

OCT2

Location

About this transcript

This transcript has 11 exons, is annotated with 24 domains and features, is associated with 19227 variant alleles and maps to 537 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000366953.3	SLC22A2-001	2597	555aa	ENSP00000355920.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5276	O15244 Q5T7Q5	NM_003058.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000366952.1	SLC22A2-003	3737	334aa	ENSP00000355919.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T7Q5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000491092.1	SLC22A2-004	1544	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000486916.1	SLC22A2-002	1017	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000498556.1	SLC22A2-007	735	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489644.1	SLC22A2-005	628	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 2,597 bps, Translation length: 555 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O15244

CCDS

This transcript is a member of the Human CCDS set: CCDS5276

Version

ENST00000366953.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000042943 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.