Transcript: ENST00000479394.1 ALDH5A1-005

Description

aldehyde dehydrogenase 5 family, member A1 [Source:HGNC Symbol;Acc:408]

Gene Synonyms

SSADH, SSDH

Location

Chromosome 6: 24,522,866-24,534,285 forward strand.

About this transcript

This transcript has 4 exons, is associated with 5228 variant alleles and maps to 266 oligo probes.

Gene

This transcript is a product of gene ENSG00000112294.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000348925.2	ALDH5A1-002	2266	548aa	ENSP00000314649.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4556	P51649	NM_170740.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000357578.3	ALDH5A1-001	5248	535aa	ENSP00000350191.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4555	F5H328 P51649 Q546H9	NM_001080.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000546278.1	ALDH5A1-201	1945	447aa	ENSP00000438193.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H328	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000491546.1	ALDH5A1-003	1699	507aa	ENSP00000417687.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J8Q5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000479394.1	ALDH5A1-005	1068	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000492697.1	ALDH5A1-006	470	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 1,068 bps,

Version

ENST00000479394.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000353916 (version 1)

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Transcript: ENST00000479394.1 ALDH5A1-005

Summary