Transcript: ENST00000402938.3 GABRR2-001

Description

gamma-aminobutyric acid (GABA) A receptor, rho 2 [Source:HGNC Symbol;Acc:4091]

Location

About this transcript

This transcript has 9 exons, is annotated with 32 domains and features, is associated with 25394 variant alleles and maps to 396 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000402938.3	GABRR2-001	1682	465aa	ENSP00000386029.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5020	B4DER2 P28476	NM_002043.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000602399.1	GABRR2-201	1631	490aa	ENSP00000473450.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DER2 P28476	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000602808.1	GABRR2-003	539	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000602432.1	GABRR2-002	1691	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 1,682 bps, Translation length: 465 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P28476

CCDS

This transcript is a member of the Human CCDS set: CCDS5020

Version

ENST00000402938.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000041482 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.