Description
lymphotoxin beta receptor (TNFR superfamily, member 3) [Source:HGNC Symbol;Acc:6718]
Gene Synonyms
CD18, D12S370, LT-BETA-R, TNF-R-III, TNFCR, TNFR-RP, TNFR2-RP, TNFR3, TNFRSF3
Location
Chromosome 12: 6,495,006-6,496,742 forward strand.
About this transcript
This transcript has 2 exons, is associated with 920 variant alleles and maps to 168 oligo probes.
Gene
This transcript is a product of gene ENSG00000111321.6 Show transcript tableHide transcript table
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000228918.4 | LTBR-001 | 2260 | 435aa | ENSP00000228918.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8544 | B3KTD9 P36941 Q75UT6 | NM_002342.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000539925.1 | LTBR-003 | 1665 | 416aa | ENSP00000440875.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS59233 | B3KTD9 P36941 | NM_001270987.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000541102.1 | LTBR-010 | 1084 | 292aa | ENSP00000438605.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H2E7 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000536876.1 | LTBR-014 | 842 | 217aa | ENSP00000437647.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H6F8 Q75UT6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000543190.1 | LTBR-012 | 785 | 74aa | ENSP00000438955.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H1S5 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000544454.1 | LTBR-006 | 632 | 148aa | ENSP00000437954.1 | Nonsense mediated decay | F5H627 | - | - | |
| ENST00000546296.1 | LTBR-004 | 783 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000541005.1 | LTBR-008 | 583 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000542830.1 | LTBR-005 | 539 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000543542.1 | LTBR-007 | 367 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000441074.2 | LTBR-009 | 2323 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000444814.2 | LTBR-002 | 1553 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000535739.1 | LTBR-013 | 928 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000440421.2 | LTBR-011 | 729 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000545445.1 | LTBR-015 | 379 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |