Transcript: ENST00000603177.1 BIN2-009

Description

bridging integrator 2 [Source:HGNC Symbol;Acc:1053]

Gene Synonyms

BRAP-1, BRAP1

Location

Chromosome 12: 51,685,946-51,691,152 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 2763 variant alleles and maps to 115 oligo probes.

Gene

This transcript is a product of gene ENSG00000110934.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000267012.4	BIN2-001	2221	565aa	ENSP00000267012.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8811	Q9UBW5	NM_016293.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000452142.2	BIN2-004	2115	533aa	ENSP00000410217.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9UBW5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000604560.1	BIN2-005	2003	531aa	ENSP00000474972.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		S4R418	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000544402.1	BIN2-002	1990	539aa	ENSP00000445874.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H0W4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000605423.1	BIN2-010	467	59aa	ENSP00000474425.1	Nonsense mediated decay		S4R3J0	-	-
ENST00000603260.1	BIN2-007	738	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000604702.1	BIN2-006	413	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000605039.1	BIN2-003	2781	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000603177.1	BIN2-009	511	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000605819.1	BIN2-008	511	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 511 bps,

Version

ENST00000603177.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000469802 (version 1)

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Transcript: ENST00000603177.1 BIN2-009

Summary